Identities computed with respect to: (1) AE000524_Helicobacter_pylori_26695_section_2_of_13
Colored by: consensus/80% and property
 1 AE000524_Helicobacter_pylori_26695_section_2_of_13 100.0%  GCTCTTATTTAG--ACC-TATG--CAATAGGATTTTAGGGTAA-CGCTTC AGGGTAGGAATACAGCAGAGTC-CCCTAA-TTTCTTGTGTGCCttAG-CC -AT------CTGAAT-AGGAGT-GC----TTCA  
 2 AE001441_Helicobacter_pylori,_strain_J99_section_2  98.2%  GCTCTTATTTGG--ACC-TATG--CAATAGGACTTTAGGGTAA-CGCTTC AGGGTAGGAATACAGCAGAGTC-CCCTAA-TTTCTTGTGTGCCttAG-CC -AT------CTGAAT-AGGAGT-GC----TTCA  
 3 AE000759_Aquifex_aeolicus_section_91_of_109_of_the  26.1%  GCCCTGCGGC----GGG-ACAG--------------GGTGAAC-TCCCCC AGGCCCGAAAGGGAGCAAGGGT-A-A--G-CCCGCCGTCCC--------G -----------TGCG-CAGGGT-CC----TAAA  
 4 AE001151_Borrelia_burgdorferi_(section_37_of_70)_o  36.9%  CCTAGGACCCGT--ACT-ATCA--------AGTATTGCTGAAT-CCCGTC AGGACTGGAAGGTAGCAGCGGT-A-A--G-CGATTTTTTTGAT--GA-GT -AC------GTAAGT-CTTAGG-------TTTA  
 5 AE001187_Treponema_pallidum_section_3_of_87_of_the  25.0%  CCGGGGCCGCCC--ACG-AAAT----------ATCCCCCAAAC-CCCGCT AGGTCCGGAAGGAAGCAACGGT-AGGGGGACGCTTCGG-TG--------C -GC------GATCCG-CCCCGG-------TTTT  
 6 AE001298_Chlamydia_trachomatis_section_25_of_87_of  36.0%  GTAAGCTGGGGA--CCT-CTTA--AGATGAGAGACTTCTGAAC-CGGGTC AGGATCGGAAGGTAGCAGCCCT-AAGGATAGGCCTTTTGTGCT--AG-GA -GT--TT--TCTCTG-GCTTAC-------TTTT  
 7 AE001624_Chlamydia_pneumoniae_section_40_of_103_of  35.8%  GGGTAAGTTGGGggCCT-TTTA--AGAGAAGGAACCTGCGAAT-CGGGTC AGGACTGGAAGGTAGCAGCCCT-AAGGAGAGTTTTCTTTTGCT--AA-AA GAAtGTTc-TCCAAC-TTACTC-------TTTT  
 8 AE002056_Deinococcus_radiodurans_R1_section_193_of  29.9%  GCATTGCTGGTG--CAG-CGCA-----GCGCGGACGCCCGAAC-CTGGTC AGAGCCGGAAGGCAGCAGCCAT-A-A--G-GGATGCTT-TGCG--GGtGC CGTtGCC--TTCCGG-CAATGC-------TTTT  
 9 AE002112_Ureaplasma_urealyticum_section_13_of_59_o  32.4%  GTCATTAC------AAT-ATTA-----------AGTAGCGAAC-CTTGTC AGGCCAGAGATGGAGCAGCAAT-AGCAAT-ATCTTTTTATG--------T -------------GT-GATGAC-------ATAT  
10 AE002321_Chlamydia_muridarum,_section_52_of_85_of_  38.6%  GTAAGTCGGGGA--CCT-CTTA--AGATGAGAGACTTCTGAAC-CGGGTC AGGATCGGAAGATAGCAGCCCT-AAGGAAAGGCCTTTTGTGCT--AA-GA -GT--CT--TCTCTG-ACTTAC-------TTTT  
11 NMA4Z2491_Neisseria_meningitidis_serogroup_A_strai  34.5%  GGCGGGTCTCCC--CGC-ATGG--------CAAATCGGAACAC-CGGGTC AGGGGCGGAAGCCAGCAGCC-C-ACTCCG-GTGCGCCAGTGCC--GG-GG ---------GTTTGG-CCCGCCGCCC---TATT  
12 AE002450_Neisseria_meningitidis_serogroup_B_strain  35.4%  GGCGGGTCTCCC--CGC-ATGG--------CAAATCGGAACAC-CGGGTC AGGGGCGGAAGCCAGCAGCC-C-ACTCCA-ATGCGCCAGTGCC--GG-GG ---------GTTTGG-CCCGCCGCCC---TATT  
13 AE003940_Xylella_fastidiosa_9a5c,_section_86_of_22  31.6%  GGTGGCCCTGCC--GGT-CCCT-CGCAACGCTAGATCGAAAAC-CCCGCC AGGGCCGGAAGGCAGCAACGGT-ATTGAT-TGATGCGGGTGCC--GA-GA TCAa-CC--GGTGGG-GCCATC-TCC---TTTT  
14 AE004188_Vibrio_cholerae_chromosome_I,_section_96_  33.3%  GGGGGCCCT-----GGTCCTCC-CGCAACACTAGTTCGTGAAC-CTGGTC AGATCCGGAAGGAAGCAGCCAC-AGCGGA-TGATGTGTGTGCC--GG-GA TGTgGCT-----GGG-GTCTCC-GCCC--ATCT  
15 AE004581_Pseudomonas_aeruginosa_PA01,_section_142_  31.1%  GGTGGCCCTGTC--GGT-CCCCcCGCAACGATTACCCGTCAAC-CTGGTC AGGTCCGGAAGGAAGCAGCCAC-AGCGGG-AACATCGTGTGCC--GG-GG TGTgGCT--GGCGGG-GCCGCC-TCC---ATTT  
16 AE005700_Caulobacter_crescentussection_26_of_359_o  25.0%  GGAG-ATCGGCG--CGG-ACGG--------AGTCCTCGCCAAC-CTGGTC AGGGCCGAGAGGCAGCAGCCAC-A-A--C-GAGATCAC-CTCT--GG-GT CGT--C---TGCCGG-T-CTCC-ACCTc-ATTT  
17 AE006092_Pasteurella_multocida_PM70_section_59_of_  37.5%  GGAAACCTTCTC--GGT-TCCT-CGCAATGGTGTCTGGTTTAC-CCGGTC AGGTTCGGAAGAAAGCAGCCAA-AGTCAGAATTTCTGTGTGCC--GA-GA TCAaGCT--GGGAAG-GTTTCC-ACCC--AACG  
18 AE006489_Streptococcus_pyogenes_M1_GAS_strain_SF37  35.1%  GGAGCAAC------ACT-TGTG--------------CGTGAAG-TGGGTC AGGGGAGGAATCCAGCAGCCCT-A-A--G-CGATTTTCGGG--------T -GT----------GT--GCTCT-------TTTT  
19 AE007179_Mycobacterium_tuberculosis_CDC1551,sectio  32.7%  GGACCCCGCGCG--GCG-TCTA-----------TCCTGTGAAC-TCCCCC AGGGCTGGAAGGCAGCAAGGGTcA-A-CG-GGCTCTGTCGG--------G ---------TGCGCG-GGGTCC--CC---TTCA  
20 AE007951_Agrobacterium_tumefaciens_strain_C58_circ  31.2%  GGGAGGTTGGTG--GTG-GACG-------AGCCACTCGCCAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-AACGAG-CCAGGCACGGGTC--GC-CG ---------TGCCAG-CCTCCC-ACC---TTTT  
21 AE008386_Streptococcus_pneumoniae_R6_section_2_of_  33.3%  GGAGCAAC------AGT-TCTG--------------CGTGAAG-CGGGTC AGGGGAGGAATCCAGCAGCCCT-A-A--G-CGATTTGAATT--------G -------------TG-TGCTCT-------TTTT  
22 AE008680_Rickettsia_conorii_Malish_7,_section_112_  33.3%  GCTAGTAGTGGG--CAT-TGTA------------CCTGTTTAG-TCGGTC AGGTCTGAAAGGAAGCAGCCAG-A-G-TG-GGATTCGA-TG--------G ---------GTCATT-ACTAGC-------ATTA  
23 AE008717_Salmonella_typhimurium_LT2,_section_25_of  32.5%  GGGGGCTCTGTT--GGTTCTCC-CGCAACGCTACTCTGTTTAC-CAGGTC AGGTCCGGAAGGAAGCAGCCAA-GGCAGA-TGACGCGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCCCC-ACCC--ATTT  
24 AF132127_Streptococcus_mutans_sorbitol_phosphoenol  31.5%  GGAGCAAC------AGC-TTTG--------------CGTGAAG-CGGGTC AGGGGAGGAATCCAGCAGCCCT-A-A--G-CGATGTAAGCT--------G -------------TG-TGCTCT-------ATTT  
25 AF203881_Zymomonas_mobilis_strain_ZM4_clone_43F4,_  31.6%  GGCGATAGTGGA--AGT-CGGG-CGGACGGTGCTGTCGCCAAC-CCGGTC AGGTCCGGAAGGAAGCAGCCGT-A-A--C-GAATTTTTA--TC--GG-GT CGTtCCG--GCTTCC-ATCGTC-------TTAA  
26 AE006305_Lactococcus_lactis_subsp_lactis_IL1403_se  25.9%  GGAGCA--------ATA-AGTT-----------TCTTACGAAG-CGTGTC AGGACCTGACGGTAGCAGCACT-A-A-GTATGGAGCTTATG--------T -----------------GCTCT-------TTTT  
27 AJ414155_Yersinia_pestis_strain_CO92_comp_genome;_  29.4%  GGAGGCCCTGTT--GGTTCTCC-CGCAACACTAACTTGTGAAC-TCGGTC AGGTCCGGAAGGAAGCAGCCGC-AGCAGG-CGAGGTGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCTCC-ACC---AATT  
28 AL627266_Salmonella_enterica_serovar_Typhi_(Salmon  31.7%  GGGGGCTCTGTT--GGTTCTCC-CGCAACGCTACTCTGTTTAC-CAGGTC AGGTCCGGAAGGAAGCAGCCAA-GGCAGA-TGACGCGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCCCC-ACCC--AATT  
29 AP001119_Buchnera_sp_APS_genomic_DNA,_comp_seq,_se  32.5%  GAGTTATCTGTT--AGC-TCCA-AACACTGCAATATTGAATAG-TTGGTC AGATTCGGAAGGAAGCAGCCAA-ATCAAT-TGATACAGGTGTT--CT-GA TAAaGCT--AACAGA--AACTC-C-----TAAA  
30 AP002551_Escherichia_coli_O157:H7_DNA,_comp_genome  32.5%  GGGGGCTCTGTT--GGTTCTCC-CGCAACGCTACTCTGTTTAC-CAGGTC AGGTCCGGAAGGAAGCAGCCAA-GGCAGA-TGACGCGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCCCC-ACCC--ATTT  
31 AP003006_Mesorhizobium_loti_DNA,_comp_genome,_sect  29.6%  GGGAGGTTGGTG--GTG-GACG-------ATCCACTCGCCAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-A-A--C-GAGCCCGGA--AC--GG-GT CAT--TG--TTCCAG-CCTCCC-ACC---TCAT  
32 AP003584_Nostoc_sp_PCC_7120_DNA,_comp_genome,_sect  33.6%  GACCTGGATCTA--TGC-GACT--------GCAACGCCTAAAC-CTTGTC AGGACCGGAAGGTAGCAGCAAC-A-C--A-GGATGCTTGTGGT--AG-GC -GT------AGTCTC-CGGGTCGCCC---TATT  
33 CJ11168X1_Campylobacter_jejuni_NCTC11168_comp_geno  64.6%  GCCTTTTCTTAG--ACC-TGTG--CAATGCTATTTTTAAGCAC-CGCTTC AGGGTGGGAACACAGCAGAGCA-CTTGAT-TTTAGTGTGTGCC--GC-AG -TTaT----CTGGGG-AAGGGT-------TTTA  
34 HD32175_Haemophilus_ducreyi_hemolytic_cytotoxin_Hh  43.6%  GGGG-TATTATT--GGT-TTCT-CGCAGCAGAATTCAGCTTAC-TTAGTC AGGGCCGGAAGGAAGCAGCTTG-GGTTGA-ATTTCTGGGTGCC--GG-GA -GTcGCT--GGTAAT-A-CCCC-ACC---TTTT  
35 HI32795_Haemophilus_influenzae_Rd_section_110_of_1  33.3%  GGAAACCTTCTC--GGT-CTCT-CGCAACGGTGTCTGGTTTAC-TCGGTC AGGTCCGGAAGGAAGCAGCCAA-AGTCGGAATTACTGTGTGCC--GA-GA AGAaGCT--GGGAAG-GTTTCCGCCC---AACT  
36 LP45SRNA_Lpneumophila_45S_RNA_homolog               32.5%  GGTGACTCTATT--GGT-CCCCtCGCGACGATAGATTGTGAAC-CCCGTC AGGCCCGGAAGGGAGCAGCGGT-AGCAGT-TGATGCGGGCGCC--GG-GG TGTgGCT--CTTAGA-GTCGCCGCCC---AACT  
37 MCSRNA_Mycoplasma_capricolum_gene_for_small_RNA     29.7%  AGCCGCGAT-----AAG-AATA------------ACATCTGAA-TGAGTT AGGACCGGAAGGTAGCAGCTAT-AAGGAA-AAGTGTTC-TG--------T ------------ATT-GCGGTT-------TTTT  
38 MG39706_Mycoplasma_genitalium_section_28_of_51_of_  29.7%  AACCATCACATC--ATT-AGAG---------------TCGAAT-CATGTC AGGCCAGAAATGGAGCAGCATT-A-A--G-ACTTGTCAGTG--------- ---------AGTGTG-ATGGTT-------TTTT  
39 ML45SRNA_Mlysodeikticus_45S_RNA_homolog             26.5%  GGCCCCTACGTG--GTG-TCAT-----------CTCGCTGAACtTCCCCC AGGACCGGAAGGTAGCAAGGGT-A-GGTG-GGCTCTGGCAG--------G ---------TGCGTGaGGGGTC-------TTCA  
40 MLEPRTN9_Mycobacterium_leprae_strain_TN_comp_genom  30.4%  GGACCCCGCGCG--GCG-TCTA-----------TCCTGTGAAC-TCCCCT AGGGCCGGAAGGCAGCAAGGGTcA-A-TG-GGCTCTGTCGG--------G ---------TGCGCG-GGGTCC-CC----TACC  
41 MM45SRNB_Mmycoides_45S_RNA_gene                     33.3%  GCCGCGAT------AAG-AATA------------ACATCTGAA-CGAGTT AGGACCGGAAGGTAGCAGCTAT-AAGGAA-AAGTGTTC-TG--------T -------------AT-TGCGGT-------TTTT  
42 MPAE44_Mycoplasma_pneumoniae_M129_section_36_of_63  29.7%  AGCCGTCACATC--ATT-ACGG---------------TCGAAT-CATGTC AGGCCAGAAATGGAGCAGCATT-A-A--G-ACTATTTAATG--------- ---------AGTGTG-ATGGTT-------TTTT  
43 MPULM03_Mycoplasma_pulmonis_(strain_UAB_CTIP)_comp  28.8%  GCCTTTAGAACA--ATA-ACCT---------------CATAAC-CCGGTC AGGACAGAAATGGAGCATCCGC-A-T-TG-AGAAGTGT-TG--------- ---------TGTCTT-TAGGTC-------TTTT  
44 PMA237851_Prochlorococcus_marinus_ddlb_(partial),_  26.8%  GACTCGGGCCCA--TGC-GGCT--------TCGACGCCTAAAT-CTGGTC AGGACCGGAAGGTAGCAGCCAC-A-A--G-GGATGCTTGAATC--TG-GC -GT------GGATTC-CGGGTC-ACC---TAAA  
45 PSP011025_Prochlorococcus_sp_ftsZ_gene_and_genes_e  32.4%  GACTCGGCCTTT--CGC-GGTT--------TTAACGCCCAAAC-CTGGTC AGGATCGGAAGGTAGCAGCCAC-A-A--G-GGATGCTTGAGGC--AG-GC -GA------GATAAC-CGAGTC-AC----TTAA  
46 RPXX04_Rickettsia_prowazekii_strain_Madrid_E,_comp  35.1%  GCTAGTAGTGGG--CAT-TGCT------------CTTGCTTAG-TTGGTC AGGTCTGAAAAGAAGCAGCCAG-G-G-TA-AGATTCTG-TG--------G ---------GTCATT-ACTAGT-------ATCA  
47 SCD25_Streptomyces_coelicolor_cosmid_D25            30.4%  GCCCCTCACGCG--GCG-CTAT-----------CTGACTGAAC-TCCCCC AGGGCCGGAAGGCAGCAAGGGT-A-GGTC-GGCTCTGGCGG--------G ---------TGCGTG-GGGGGCGTCTCc-TTTG  
48 SME591782_Sinorhizobium_meliloti_1021_comp_chromos  31.3%  GGGAGGTTGGTG--GTG-GACG-------AGCCACTCGCCAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-A-A-CG-AGCCCCGGC--AC--GG-GT CAT--CG--TGCCAG-CCTCCC-ACC---TTCT  
49 SSD912_Synechocystis_sp_PCC_6803_DNA,_comp_genome,  30.4%  GGCTCGGACTCA--TGC-GATT--------ACAACGCCCAAAT-CTTGTC AGGACCGGAAGGTAGCAGCAAT-A-A--G-GGATGCTTGTGGT--AG-GC -GT------GAACTC-CGGGCT-TCCGgcTTTT  
50 TT45SRNA_Thermus_thermophilus_ffs_gene_for_45S_RNA  33.6%  GCCCCCGGTCCAg-CGC-GGCG-------GGCCAGGCGTGAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-A-A--G-CGCCTCGGT--CC--GG-GC -GCcGCTggGAAGCC-GGGGGC-GCTTccTTGG  
51 Neisseria_Gonorrhoeae                               34.5%  G-CGGGTCTCCC--CGC-ATGG--------CAAATCGGAACAC-CGGGTC AGGGGCGGAAGCCAGCAGCC-C-ACTCCG-ATGCGCCAGTGCC--GG-GG ---------GTTTGG-TCCGCCGCCC---TATT  

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