Identities computed with respect to: (1) AE000524_Helicobacter_pylori_26695_section_2_of_13 Colored by: consensus/80% and property
1 AE000524_Helicobacter_pylori_26695_section_2_of_13 100.0% GCTCTTATTTAG--ACC-TATG--CAATAGGATTTTAGGGTAA-CGCTTC AGGGTAGGAATACAGCAGAGTC-CCCTAA-TTTCTTGTGTGCCttAG-CC -AT------CTGAAT-AGGAGT-GC----TTCA 2 AE001441_Helicobacter_pylori,_strain_J99_section_2 98.2% GCTCTTATTTGG--ACC-TATG--CAATAGGACTTTAGGGTAA-CGCTTC AGGGTAGGAATACAGCAGAGTC-CCCTAA-TTTCTTGTGTGCCttAG-CC -AT------CTGAAT-AGGAGT-GC----TTCA 3 AE000759_Aquifex_aeolicus_section_91_of_109_of_the 26.1% GCCCTGCGGC----GGG-ACAG--------------GGTGAAC-TCCCCC AGGCCCGAAAGGGAGCAAGGGT-A-A--G-CCCGCCGTCCC--------G -----------TGCG-CAGGGT-CC----TAAA 4 AE001151_Borrelia_burgdorferi_(section_37_of_70)_o 36.9% CCTAGGACCCGT--ACT-ATCA--------AGTATTGCTGAAT-CCCGTC AGGACTGGAAGGTAGCAGCGGT-A-A--G-CGATTTTTTTGAT--GA-GT -AC------GTAAGT-CTTAGG-------TTTA 5 AE001187_Treponema_pallidum_section_3_of_87_of_the 25.0% CCGGGGCCGCCC--ACG-AAAT----------ATCCCCCAAAC-CCCGCT AGGTCCGGAAGGAAGCAACGGT-AGGGGGACGCTTCGG-TG--------C -GC------GATCCG-CCCCGG-------TTTT 6 AE001298_Chlamydia_trachomatis_section_25_of_87_of 36.0% GTAAGCTGGGGA--CCT-CTTA--AGATGAGAGACTTCTGAAC-CGGGTC AGGATCGGAAGGTAGCAGCCCT-AAGGATAGGCCTTTTGTGCT--AG-GA -GT--TT--TCTCTG-GCTTAC-------TTTT 7 AE001624_Chlamydia_pneumoniae_section_40_of_103_of 35.8% GGGTAAGTTGGGggCCT-TTTA--AGAGAAGGAACCTGCGAAT-CGGGTC AGGACTGGAAGGTAGCAGCCCT-AAGGAGAGTTTTCTTTTGCT--AA-AA GAAtGTTc-TCCAAC-TTACTC-------TTTT 8 AE002056_Deinococcus_radiodurans_R1_section_193_of 29.9% GCATTGCTGGTG--CAG-CGCA-----GCGCGGACGCCCGAAC-CTGGTC AGAGCCGGAAGGCAGCAGCCAT-A-A--G-GGATGCTT-TGCG--GGtGC CGTtGCC--TTCCGG-CAATGC-------TTTT 9 AE002112_Ureaplasma_urealyticum_section_13_of_59_o 32.4% GTCATTAC------AAT-ATTA-----------AGTAGCGAAC-CTTGTC AGGCCAGAGATGGAGCAGCAAT-AGCAAT-ATCTTTTTATG--------T -------------GT-GATGAC-------ATAT 10 AE002321_Chlamydia_muridarum,_section_52_of_85_of_ 38.6% GTAAGTCGGGGA--CCT-CTTA--AGATGAGAGACTTCTGAAC-CGGGTC AGGATCGGAAGATAGCAGCCCT-AAGGAAAGGCCTTTTGTGCT--AA-GA -GT--CT--TCTCTG-ACTTAC-------TTTT 11 NMA4Z2491_Neisseria_meningitidis_serogroup_A_strai 34.5% GGCGGGTCTCCC--CGC-ATGG--------CAAATCGGAACAC-CGGGTC AGGGGCGGAAGCCAGCAGCC-C-ACTCCG-GTGCGCCAGTGCC--GG-GG ---------GTTTGG-CCCGCCGCCC---TATT 12 AE002450_Neisseria_meningitidis_serogroup_B_strain 35.4% GGCGGGTCTCCC--CGC-ATGG--------CAAATCGGAACAC-CGGGTC AGGGGCGGAAGCCAGCAGCC-C-ACTCCA-ATGCGCCAGTGCC--GG-GG ---------GTTTGG-CCCGCCGCCC---TATT 13 AE003940_Xylella_fastidiosa_9a5c,_section_86_of_22 31.6% GGTGGCCCTGCC--GGT-CCCT-CGCAACGCTAGATCGAAAAC-CCCGCC AGGGCCGGAAGGCAGCAACGGT-ATTGAT-TGATGCGGGTGCC--GA-GA TCAa-CC--GGTGGG-GCCATC-TCC---TTTT 14 AE004188_Vibrio_cholerae_chromosome_I,_section_96_ 33.3% GGGGGCCCT-----GGTCCTCC-CGCAACACTAGTTCGTGAAC-CTGGTC AGATCCGGAAGGAAGCAGCCAC-AGCGGA-TGATGTGTGTGCC--GG-GA TGTgGCT-----GGG-GTCTCC-GCCC--ATCT 15 AE004581_Pseudomonas_aeruginosa_PA01,_section_142_ 31.1% GGTGGCCCTGTC--GGT-CCCCcCGCAACGATTACCCGTCAAC-CTGGTC AGGTCCGGAAGGAAGCAGCCAC-AGCGGG-AACATCGTGTGCC--GG-GG TGTgGCT--GGCGGG-GCCGCC-TCC---ATTT 16 AE005700_Caulobacter_crescentussection_26_of_359_o 25.0% GGAG-ATCGGCG--CGG-ACGG--------AGTCCTCGCCAAC-CTGGTC AGGGCCGAGAGGCAGCAGCCAC-A-A--C-GAGATCAC-CTCT--GG-GT CGT--C---TGCCGG-T-CTCC-ACCTc-ATTT 17 AE006092_Pasteurella_multocida_PM70_section_59_of_ 37.5% GGAAACCTTCTC--GGT-TCCT-CGCAATGGTGTCTGGTTTAC-CCGGTC AGGTTCGGAAGAAAGCAGCCAA-AGTCAGAATTTCTGTGTGCC--GA-GA TCAaGCT--GGGAAG-GTTTCC-ACCC--AACG 18 AE006489_Streptococcus_pyogenes_M1_GAS_strain_SF37 35.1% GGAGCAAC------ACT-TGTG--------------CGTGAAG-TGGGTC AGGGGAGGAATCCAGCAGCCCT-A-A--G-CGATTTTCGGG--------T -GT----------GT--GCTCT-------TTTT 19 AE007179_Mycobacterium_tuberculosis_CDC1551,sectio 32.7% GGACCCCGCGCG--GCG-TCTA-----------TCCTGTGAAC-TCCCCC AGGGCTGGAAGGCAGCAAGGGTcA-A-CG-GGCTCTGTCGG--------G ---------TGCGCG-GGGTCC--CC---TTCA 20 AE007951_Agrobacterium_tumefaciens_strain_C58_circ 31.2% GGGAGGTTGGTG--GTG-GACG-------AGCCACTCGCCAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-AACGAG-CCAGGCACGGGTC--GC-CG ---------TGCCAG-CCTCCC-ACC---TTTT 21 AE008386_Streptococcus_pneumoniae_R6_section_2_of_ 33.3% GGAGCAAC------AGT-TCTG--------------CGTGAAG-CGGGTC AGGGGAGGAATCCAGCAGCCCT-A-A--G-CGATTTGAATT--------G -------------TG-TGCTCT-------TTTT 22 AE008680_Rickettsia_conorii_Malish_7,_section_112_ 33.3% GCTAGTAGTGGG--CAT-TGTA------------CCTGTTTAG-TCGGTC AGGTCTGAAAGGAAGCAGCCAG-A-G-TG-GGATTCGA-TG--------G ---------GTCATT-ACTAGC-------ATTA 23 AE008717_Salmonella_typhimurium_LT2,_section_25_of 32.5% GGGGGCTCTGTT--GGTTCTCC-CGCAACGCTACTCTGTTTAC-CAGGTC AGGTCCGGAAGGAAGCAGCCAA-GGCAGA-TGACGCGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCCCC-ACCC--ATTT 24 AF132127_Streptococcus_mutans_sorbitol_phosphoenol 31.5% GGAGCAAC------AGC-TTTG--------------CGTGAAG-CGGGTC AGGGGAGGAATCCAGCAGCCCT-A-A--G-CGATGTAAGCT--------G -------------TG-TGCTCT-------ATTT 25 AF203881_Zymomonas_mobilis_strain_ZM4_clone_43F4,_ 31.6% GGCGATAGTGGA--AGT-CGGG-CGGACGGTGCTGTCGCCAAC-CCGGTC AGGTCCGGAAGGAAGCAGCCGT-A-A--C-GAATTTTTA--TC--GG-GT CGTtCCG--GCTTCC-ATCGTC-------TTAA 26 AE006305_Lactococcus_lactis_subsp_lactis_IL1403_se 25.9% GGAGCA--------ATA-AGTT-----------TCTTACGAAG-CGTGTC AGGACCTGACGGTAGCAGCACT-A-A-GTATGGAGCTTATG--------T -----------------GCTCT-------TTTT 27 AJ414155_Yersinia_pestis_strain_CO92_comp_genome;_ 29.4% GGAGGCCCTGTT--GGTTCTCC-CGCAACACTAACTTGTGAAC-TCGGTC AGGTCCGGAAGGAAGCAGCCGC-AGCAGG-CGAGGTGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCTCC-ACC---AATT 28 AL627266_Salmonella_enterica_serovar_Typhi_(Salmon 31.7% GGGGGCTCTGTT--GGTTCTCC-CGCAACGCTACTCTGTTTAC-CAGGTC AGGTCCGGAAGGAAGCAGCCAA-GGCAGA-TGACGCGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCCCC-ACCC--AATT 29 AP001119_Buchnera_sp_APS_genomic_DNA,_comp_seq,_se 32.5% GAGTTATCTGTT--AGC-TCCA-AACACTGCAATATTGAATAG-TTGGTC AGATTCGGAAGGAAGCAGCCAA-ATCAAT-TGATACAGGTGTT--CT-GA TAAaGCT--AACAGA--AACTC-C-----TAAA 30 AP002551_Escherichia_coli_O157:H7_DNA,_comp_genome 32.5% GGGGGCTCTGTT--GGTTCTCC-CGCAACGCTACTCTGTTTAC-CAGGTC AGGTCCGGAAGGAAGCAGCCAA-GGCAGA-TGACGCGTGTGCC--GG-GA TGTaGCT--GGCAGG-GCCCCC-ACCC--ATTT 31 AP003006_Mesorhizobium_loti_DNA,_comp_genome,_sect 29.6% GGGAGGTTGGTG--GTG-GACG-------ATCCACTCGCCAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-A-A--C-GAGCCCGGA--AC--GG-GT CAT--TG--TTCCAG-CCTCCC-ACC---TCAT 32 AP003584_Nostoc_sp_PCC_7120_DNA,_comp_genome,_sect 33.6% GACCTGGATCTA--TGC-GACT--------GCAACGCCTAAAC-CTTGTC AGGACCGGAAGGTAGCAGCAAC-A-C--A-GGATGCTTGTGGT--AG-GC -GT------AGTCTC-CGGGTCGCCC---TATT 33 CJ11168X1_Campylobacter_jejuni_NCTC11168_comp_geno 64.6% GCCTTTTCTTAG--ACC-TGTG--CAATGCTATTTTTAAGCAC-CGCTTC AGGGTGGGAACACAGCAGAGCA-CTTGAT-TTTAGTGTGTGCC--GC-AG -TTaT----CTGGGG-AAGGGT-------TTTA 34 HD32175_Haemophilus_ducreyi_hemolytic_cytotoxin_Hh 43.6% GGGG-TATTATT--GGT-TTCT-CGCAGCAGAATTCAGCTTAC-TTAGTC AGGGCCGGAAGGAAGCAGCTTG-GGTTGA-ATTTCTGGGTGCC--GG-GA -GTcGCT--GGTAAT-A-CCCC-ACC---TTTT 35 HI32795_Haemophilus_influenzae_Rd_section_110_of_1 33.3% GGAAACCTTCTC--GGT-CTCT-CGCAACGGTGTCTGGTTTAC-TCGGTC AGGTCCGGAAGGAAGCAGCCAA-AGTCGGAATTACTGTGTGCC--GA-GA AGAaGCT--GGGAAG-GTTTCCGCCC---AACT 36 LP45SRNA_Lpneumophila_45S_RNA_homolog 32.5% GGTGACTCTATT--GGT-CCCCtCGCGACGATAGATTGTGAAC-CCCGTC AGGCCCGGAAGGGAGCAGCGGT-AGCAGT-TGATGCGGGCGCC--GG-GG TGTgGCT--CTTAGA-GTCGCCGCCC---AACT 37 MCSRNA_Mycoplasma_capricolum_gene_for_small_RNA 29.7% AGCCGCGAT-----AAG-AATA------------ACATCTGAA-TGAGTT AGGACCGGAAGGTAGCAGCTAT-AAGGAA-AAGTGTTC-TG--------T ------------ATT-GCGGTT-------TTTT 38 MG39706_Mycoplasma_genitalium_section_28_of_51_of_ 29.7% AACCATCACATC--ATT-AGAG---------------TCGAAT-CATGTC AGGCCAGAAATGGAGCAGCATT-A-A--G-ACTTGTCAGTG--------- ---------AGTGTG-ATGGTT-------TTTT 39 ML45SRNA_Mlysodeikticus_45S_RNA_homolog 26.5% GGCCCCTACGTG--GTG-TCAT-----------CTCGCTGAACtTCCCCC AGGACCGGAAGGTAGCAAGGGT-A-GGTG-GGCTCTGGCAG--------G ---------TGCGTGaGGGGTC-------TTCA 40 MLEPRTN9_Mycobacterium_leprae_strain_TN_comp_genom 30.4% GGACCCCGCGCG--GCG-TCTA-----------TCCTGTGAAC-TCCCCT AGGGCCGGAAGGCAGCAAGGGTcA-A-TG-GGCTCTGTCGG--------G ---------TGCGCG-GGGTCC-CC----TACC 41 MM45SRNB_Mmycoides_45S_RNA_gene 33.3% GCCGCGAT------AAG-AATA------------ACATCTGAA-CGAGTT AGGACCGGAAGGTAGCAGCTAT-AAGGAA-AAGTGTTC-TG--------T -------------AT-TGCGGT-------TTTT 42 MPAE44_Mycoplasma_pneumoniae_M129_section_36_of_63 29.7% AGCCGTCACATC--ATT-ACGG---------------TCGAAT-CATGTC AGGCCAGAAATGGAGCAGCATT-A-A--G-ACTATTTAATG--------- ---------AGTGTG-ATGGTT-------TTTT 43 MPULM03_Mycoplasma_pulmonis_(strain_UAB_CTIP)_comp 28.8% GCCTTTAGAACA--ATA-ACCT---------------CATAAC-CCGGTC AGGACAGAAATGGAGCATCCGC-A-T-TG-AGAAGTGT-TG--------- ---------TGTCTT-TAGGTC-------TTTT 44 PMA237851_Prochlorococcus_marinus_ddlb_(partial),_ 26.8% GACTCGGGCCCA--TGC-GGCT--------TCGACGCCTAAAT-CTGGTC AGGACCGGAAGGTAGCAGCCAC-A-A--G-GGATGCTTGAATC--TG-GC -GT------GGATTC-CGGGTC-ACC---TAAA 45 PSP011025_Prochlorococcus_sp_ftsZ_gene_and_genes_e 32.4% GACTCGGCCTTT--CGC-GGTT--------TTAACGCCCAAAC-CTGGTC AGGATCGGAAGGTAGCAGCCAC-A-A--G-GGATGCTTGAGGC--AG-GC -GA------GATAAC-CGAGTC-AC----TTAA 46 RPXX04_Rickettsia_prowazekii_strain_Madrid_E,_comp 35.1% GCTAGTAGTGGG--CAT-TGCT------------CTTGCTTAG-TTGGTC AGGTCTGAAAAGAAGCAGCCAG-G-G-TA-AGATTCTG-TG--------G ---------GTCATT-ACTAGT-------ATCA 47 SCD25_Streptomyces_coelicolor_cosmid_D25 30.4% GCCCCTCACGCG--GCG-CTAT-----------CTGACTGAAC-TCCCCC AGGGCCGGAAGGCAGCAAGGGT-A-GGTC-GGCTCTGGCGG--------G ---------TGCGTG-GGGGGCGTCTCc-TTTG 48 SME591782_Sinorhizobium_meliloti_1021_comp_chromos 31.3% GGGAGGTTGGTG--GTG-GACG-------AGCCACTCGCCAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-A-A-CG-AGCCCCGGC--AC--GG-GT CAT--CG--TGCCAG-CCTCCC-ACC---TTCT 49 SSD912_Synechocystis_sp_PCC_6803_DNA,_comp_genome, 30.4% GGCTCGGACTCA--TGC-GATT--------ACAACGCCCAAAT-CTTGTC AGGACCGGAAGGTAGCAGCAAT-A-A--G-GGATGCTTGTGGT--AG-GC -GT------GAACTC-CGGGCT-TCCGgcTTTT 50 TT45SRNA_Thermus_thermophilus_ffs_gene_for_45S_RNA 33.6% GCCCCCGGTCCAg-CGC-GGCG-------GGCCAGGCGTGAAC-CGGGTC AGGTCCGGAAGGAAGCAGCCCT-A-A--G-CGCCTCGGT--CC--GG-GC -GCcGCTggGAAGCC-GGGGGC-GCTTccTTGG 51 Neisseria_Gonorrhoeae 34.5% G-CGGGTCTCCC--CGC-ATGG--------CAAATCGGAACAC-CGGGTC AGGGGCGGAAGCCAGCAGCC-C-ACTCCG-ATGCGCCAGTGCC--GG-GG ---------GTTTGG-TCCGCCGCCC---TATT |
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