EMBOSS explorer

jaspscan

Scans DNA sequences for transcription factors (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Matrix set
Comma separated matrix list
Required section
Threshold percentage
Additional section
Comma separated matrix list for exclusion
Scan both strands?
Output section
Output report format
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.